release_candidate srr gse species platform identity_group processing_group measurement_unit sample_identity_rule isoquant_core_status file_contract_status gene_counts_available gene_counts_bytes gene_counts_scope transcript_counts_available transcript_counts_bytes transcript_counts_scope read_assignments_available read_assignments_bytes read_assignments_scope transcript_models_available transcript_models_bytes transcript_models_scope diu_available diu_bytes ase_available ase_bytes apa_available apa_bytes junction_available junction_bytes layer_status unavailable_reason evidence_source scTHREAD_NAR_release_20260803 CT GSA_mouse_testis_11week mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 836123 run-level positive gene IDs (CT.gene_counts.tsv) True 3038174 run-level positive transcript IDs (CT.transcript_counts.tsv) True 936283068 run-level read assignments True 315 run-level GTF True 770004 True 317844 True 3624349 True 25329992 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 MTECTRSCRNAONTR2 GSA_mouse_testis_11week mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 836646 run-level positive gene IDs (MTECTRSCRNAONTR2.gene_counts.tsv) True 3037640 run-level positive transcript IDs (MTECTRSCRNAONTR2.transcript_counts.tsv) True 869079552 run-level read assignments True 385 run-level GTF True 818238 True 289891 True 3567112 True 19984694 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR7173239 GSE114157 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE114157::GSM3135848 isoquant-core-present isoquant-core-present True 298637 shared study matrix column SRR7173239 (GSE114157.gene_grouped_file_name_counts.tsv) True 313006 shared study matrix column SRR7173239 (GSE114157.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 62575967 study-level GTF (GSE114157.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR7173240 GSE114157 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE114157::GSM3135849 isoquant-core-present isoquant-core-present True 298637 shared study matrix column SRR7173240 (GSE114157.gene_grouped_file_name_counts.tsv) True 313006 shared study matrix column SRR7173240 (GSE114157.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 62575967 study-level GTF (GSE114157.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR7173241 GSE114157 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE114157::GSM3135850 isoquant-core-present isoquant-core-present True 298637 shared study matrix column SRR7173241 (GSE114157.gene_grouped_file_name_counts.tsv) True 313006 shared study matrix column SRR7173241 (GSE114157.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 62575967 study-level GTF (GSE114157.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR7173242 GSE114157 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE114157::GSM3135851 isoquant-core-present isoquant-core-present True 298637 shared study matrix column SRR7173242 (GSE114157.gene_grouped_file_name_counts.tsv) True 313006 shared study matrix column SRR7173242 (GSE114157.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 62575967 study-level GTF (GSE114157.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR7173246 GSE114157 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE114157::GSM3135855 isoquant-core-present isoquant-core-present True 298637 shared study matrix column SRR7173246 (GSE114157.gene_grouped_file_name_counts.tsv) True 313006 shared study matrix column SRR7173246 (GSE114157.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 62575967 study-level GTF (GSE114157.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR9008425 GSE130708 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 823529 run-level positive gene IDs (SRR9008425.gene_counts.tsv) True 3024425 run-level positive transcript IDs (SRR9008425.transcript_counts.tsv) True 62191114 run-level read assignments True 153899402 run-level GTF True 449237 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR9008427 GSE130708 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 820503 run-level positive gene IDs (SRR9008427.gene_counts.tsv) True 3021398 run-level positive transcript IDs (SRR9008427.transcript_counts.tsv) True 44419444 run-level read assignments True 154920318 run-level GTF True 434130 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR9008428 GSE130708 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 823655 run-level positive gene IDs (SRR9008428.gene_counts.tsv) True 3024109 run-level positive transcript IDs (SRR9008428.transcript_counts.tsv) True 77802458 run-level read assignments True 159614230 run-level GTF True 558016 True 446681 True 1565630 True 9467524 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR9008429 GSE130708 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 824797 run-level positive gene IDs (SRR9008429.gene_counts.tsv) True 3025670 run-level positive transcript IDs (SRR9008429.transcript_counts.tsv) True 87907324 run-level read assignments True 169656156 run-level GTF True 608308 True 455362 True 1680066 True 11514808 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR9008431 GSE130708 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 823365 run-level positive gene IDs (SRR9008431.gene_counts.tsv) True 3024050 run-level positive transcript IDs (SRR9008431.transcript_counts.tsv) True 72873756 run-level read assignments True 159530787 run-level GTF True 560225 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR9008433 GSE130708 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 822979 run-level positive gene IDs (SRR9008433.gene_counts.tsv) True 3023563 run-level positive transcript IDs (SRR9008433.transcript_counts.tsv) True 68738857 run-level read assignments True 153574692 run-level GTF True 510169 True 417282 True 1474545 True 9874235 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR12699083 GSE158450 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 837165 run-level positive gene IDs (SRR12699083.gene_counts.tsv) True 3042321 run-level positive transcript IDs (SRR12699083.transcript_counts.tsv) True 385500882 run-level read assignments True 286308326 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR12699084 GSE158450 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 829054 run-level positive gene IDs (SRR12699084.gene_counts.tsv) True 3028666 run-level positive transcript IDs (SRR12699084.transcript_counts.tsv) True 135345497 run-level read assignments True 211573692 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR12699085 GSE158450 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 827355 run-level positive gene IDs (SRR12699085.gene_counts.tsv) True 3028085 run-level positive transcript IDs (SRR12699085.transcript_counts.tsv) True 114210871 run-level read assignments True 208358901 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR12699086 GSE158450 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 826518 run-level positive gene IDs (SRR12699086.gene_counts.tsv) True 3025518 run-level positive transcript IDs (SRR12699086.transcript_counts.tsv) True 104371901 run-level read assignments True 186085417 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808726 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 812151 run-level positive gene IDs (SRR14808726.gene_counts.tsv) True 4746325 run-level positive transcript IDs (SRR14808726.transcript_counts.tsv) True 10418674 run-level read assignments True 40322527 run-level GTF True 33730 True 92640 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808727 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 813938 run-level positive gene IDs (SRR14808727.gene_counts.tsv) True 4746585 run-level positive transcript IDs (SRR14808727.transcript_counts.tsv) True 15736626 run-level read assignments True 55607441 run-level GTF False True 120055 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808728 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 819300 run-level positive gene IDs (SRR14808728.gene_counts.tsv) True 4748873 run-level positive transcript IDs (SRR14808728.transcript_counts.tsv) True 46138289 run-level read assignments True 130948410 run-level GTF True 66489 True 259756 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808729 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 821302 run-level positive gene IDs (SRR14808729.gene_counts.tsv) True 4750049 run-level positive transcript IDs (SRR14808729.transcript_counts.tsv) True 64091743 run-level read assignments True 151465966 run-level GTF True 125509 True 302956 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808730 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 820595 run-level positive gene IDs (SRR14808730.gene_counts.tsv) True 4749613 run-level positive transcript IDs (SRR14808730.transcript_counts.tsv) True 57380392 run-level read assignments True 144659900 run-level GTF True 103802 True 289194 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808732 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 820412 run-level positive gene IDs (SRR14808732.gene_counts.tsv) True 4749506 run-level positive transcript IDs (SRR14808732.transcript_counts.tsv) True 55236632 run-level read assignments True 141340409 run-level GTF True 94767 True 281644 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808733 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 820135 run-level positive gene IDs (SRR14808733.gene_counts.tsv) True 4749318 run-level positive transcript IDs (SRR14808733.transcript_counts.tsv) True 52667058 run-level read assignments True 139228932 run-level GTF True 89384 True 275855 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808735 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 819236 run-level positive gene IDs (SRR14808735.gene_counts.tsv) True 4748913 run-level positive transcript IDs (SRR14808735.transcript_counts.tsv) True 45983776 run-level read assignments True 131390589 run-level GTF True 72951 True 261313 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808736 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 815678 run-level positive gene IDs (SRR14808736.gene_counts.tsv) True 4747369 run-level positive transcript IDs (SRR14808736.transcript_counts.tsv) True 27221666 run-level read assignments True 100169708 run-level GTF False True 110209 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808737 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 812183 run-level positive gene IDs (SRR14808737.gene_counts.tsv) True 4746385 run-level positive transcript IDs (SRR14808737.transcript_counts.tsv) True 9102183 run-level read assignments True 52332731 run-level GTF True 35630 True 37613 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808738 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 813605 run-level positive gene IDs (SRR14808738.gene_counts.tsv) True 4746744 run-level positive transcript IDs (SRR14808738.transcript_counts.tsv) True 15477055 run-level read assignments True 72801749 run-level GTF True 58250 True 63655 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808739 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 812780 run-level positive gene IDs (SRR14808739.gene_counts.tsv) True 4746524 run-level positive transcript IDs (SRR14808739.transcript_counts.tsv) True 11765758 run-level read assignments True 60887577 run-level GTF True 44341 True 48709 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808740 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 817307 run-level positive gene IDs (SRR14808740.gene_counts.tsv) True 4747990 run-level positive transcript IDs (SRR14808740.transcript_counts.tsv) True 37145691 run-level read assignments True 118294270 run-level GTF True 6885 True 144109 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808741 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 814546 run-level positive gene IDs (SRR14808741.gene_counts.tsv) True 4746989 run-level positive transcript IDs (SRR14808741.transcript_counts.tsv) True 20137404 run-level read assignments True 86110917 run-level GTF True 42274 True 45802 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808743 GSE178175 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 829627 run-level positive gene IDs (SRR14808743.gene_counts.tsv) True 4758487 run-level positive transcript IDs (SRR14808743.transcript_counts.tsv) True 200986316 run-level read assignments True 176094310 run-level GTF True 608543 True 637343 True 3671404 True 21178757 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808744 GSE178175 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838635 run-level positive gene IDs (SRR14808744.gene_counts.tsv) True 4774359 run-level positive transcript IDs (SRR14808744.transcript_counts.tsv) True 598916951 run-level read assignments True 226505352 run-level GTF True 4101 True 6654 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808745 GSE178175 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839022 run-level positive gene IDs (SRR14808745.gene_counts.tsv) True 4775538 run-level positive transcript IDs (SRR14808745.transcript_counts.tsv) True 622538850 run-level read assignments True 230049306 run-level GTF True 1093613 True 514835 True 5703670 True 30457555 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808746 GSE178175 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 834982 run-level positive gene IDs (SRR14808746.gene_counts.tsv) True 4768166 run-level positive transcript IDs (SRR14808746.transcript_counts.tsv) True 417400634 run-level read assignments True 197460388 run-level GTF True 831771 True 667054 True 4418164 True 22099194 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR14808747 GSE178175 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838911 run-level positive gene IDs (SRR14808747.gene_counts.tsv) True 4775621 run-level positive transcript IDs (SRR14808747.transcript_counts.tsv) True 675644450 run-level read assignments True 219527521 run-level GTF True 8660 True 7938 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR17074937 GSE178175 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 815237 run-level positive gene IDs (SRR17074937.gene_counts.tsv) True 4746696 run-level positive transcript IDs (SRR17074937.transcript_counts.tsv) True 31356898 run-level read assignments True 91453064 run-level GTF True 1790 True 204662 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR17074938 GSE178175 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 820856 run-level positive gene IDs (SRR17074938.gene_counts.tsv) True 3021434 run-level positive transcript IDs (SRR17074938.transcript_counts.tsv) True 42313638 run-level read assignments True 131030742 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248566 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618242 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248566 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248566 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248568 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618244 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248568 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248568 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248569 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618245 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248569 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248569 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248570 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618246 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248570 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248570 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248571 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618247 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248571 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248571 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248573 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618249 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248573 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248573 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248574 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618250 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248574 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248574 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248575 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618251 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248575 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248575 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248576 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618252 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248576 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248576 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248577 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618253 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248577 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248577 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248578 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618254 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248578 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248578 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248579 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618255 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248579 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248579 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248581 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618257 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248581 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248581 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248582 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618258 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248582 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248582 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248583 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618259 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248583 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248583 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248584 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618260 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248584 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248584 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248585 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618261 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248585 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248585 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248586 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618262 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248586 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248586 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248587 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618263 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248587 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248587 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248588 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618264 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248588 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248588 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248589 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618265 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248589 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248589 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248590 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618266 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248590 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248590 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248591 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618267 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248591 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248591 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248592 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618268 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248592 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248592 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248593 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618269 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248593 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248593 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248594 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618270 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248594 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248594 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248595 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618271 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248595 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248595 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248596 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618272 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248596 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248596 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248597 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618273 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248597 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248597 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248598 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618274 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248598 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248598 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248599 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618275 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248599 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248599 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248601 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618277 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248601 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248601 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248602 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618278 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248602 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248602 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248603 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618279 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248603 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248603 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248606 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618282 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248606 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248606 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248607 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618283 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248607 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248607 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248608 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618284 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248608 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248608 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248609 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618285 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248609 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248609 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248610 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618286 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248610 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248610 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248611 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618287 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248611 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248611 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248612 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618288 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248612 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248612 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR16248613 GSE185554 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE185554::GSM5618289 isoquant-core-present isoquant-core-present True 2524341 shared study matrix column SRR16248613 (GSE185554.gene_grouped_file_name_counts.tsv) True 3549431 shared study matrix column SRR16248613 (GSE185554.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 146639194 study-level GTF (GSE185554.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21492154 GSE212945 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842674 run-level positive gene IDs (SRR21492154.gene_counts.tsv) True 4777095 run-level positive transcript IDs (SRR21492154.transcript_counts.tsv) True 837359276 run-level read assignments True 236899456 run-level GTF True 624606 True 216798 True 3283759 True 20054406 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21492155 GSE212945 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 840001 run-level positive gene IDs (SRR21492155.gene_counts.tsv) True 4773777 run-level positive transcript IDs (SRR21492155.transcript_counts.tsv) True 834139105 run-level read assignments True 222704668 run-level GTF True 626010 True 271389 True 3473733 True 23599993 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21492156 GSE212945 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843407 run-level positive gene IDs (SRR21492156.gene_counts.tsv) True 4776878 run-level positive transcript IDs (SRR21492156.transcript_counts.tsv) True 967055021 run-level read assignments True 253290868 run-level GTF True 631615 True 248429 True 2344040 True 17474185 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21492157 GSE212945 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 836346 run-level positive gene IDs (SRR21492157.gene_counts.tsv) True 4765119 run-level positive transcript IDs (SRR21492157.transcript_counts.tsv) True 415794817 run-level read assignments True 203314396 run-level GTF True 519945 True 238157 True 2229653 True 12299146 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR34318914 GSE212945 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839096 run-level positive gene IDs (SRR34318914.gene_counts.tsv) True 4771595 run-level positive transcript IDs (SRR34318914.transcript_counts.tsv) True 780997629 run-level read assignments True 226712547 run-level GTF True 572745 True 205876 True 3756109 True 21150506 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR34318915 GSE212945 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 828543 run-level positive gene IDs (SRR34318915.gene_counts.tsv) True 4756059 run-level positive transcript IDs (SRR34318915.transcript_counts.tsv) True 234394794 run-level read assignments True 138692311 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21714350 GSE214231 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 811143 run-level positive gene IDs (SRR21714350.gene_counts.tsv) True 4746308 run-level positive transcript IDs (SRR21714350.transcript_counts.tsv) True 9065418 run-level read assignments True 9423139 run-level GTF True 17289 False True 92614 True 336558 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21714351 GSE214231 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 811107 run-level positive gene IDs (SRR21714351.gene_counts.tsv) True 4746300 run-level positive transcript IDs (SRR21714351.transcript_counts.tsv) True 7104868 run-level read assignments True 8818975 run-level GTF True 17468 False True 86019 True 320303 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21714352 GSE214231 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 811031 run-level positive gene IDs (SRR21714352.gene_counts.tsv) True 4746270 run-level positive transcript IDs (SRR21714352.transcript_counts.tsv) True 4610193 run-level read assignments True 7040289 run-level GTF True 14669 False True 67940 True 255030 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21714353 GSE214231 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 811537 run-level positive gene IDs (SRR21714353.gene_counts.tsv) True 4746470 run-level positive transcript IDs (SRR21714353.transcript_counts.tsv) True 7000068 run-level read assignments True 27067623 run-level GTF True 38792 False True 203592 True 918807 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21714354 GSE214231 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 810868 run-level positive gene IDs (SRR21714354.gene_counts.tsv) True 4746205 run-level positive transcript IDs (SRR21714354.transcript_counts.tsv) True 1670403 run-level read assignments True 3671709 run-level GTF True 8041 False True 29656 True 118013 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR21714355 GSE214231 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 810960 run-level positive gene IDs (SRR21714355.gene_counts.tsv) True 4746245 run-level positive transcript IDs (SRR21714355.transcript_counts.tsv) True 2529851 run-level read assignments True 6632190 run-level GTF True 13756 False True 51244 True 206471 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR23271781 GSE224045 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843546 run-level positive gene IDs (SRR23271781.gene_counts.tsv) True 4783426 run-level positive transcript IDs (SRR23271781.transcript_counts.tsv) True 915992764 run-level read assignments True 300965430 run-level GTF True 679348 True 143809 True 2494201 True 21046068 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR26865982 GSE248118 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 845500 run-level positive gene IDs (SRR26865982.gene_counts.tsv) True 4785848 run-level positive transcript IDs (SRR26865982.transcript_counts.tsv) True 1169075858 run-level read assignments True 290820954 run-level GTF True 808013 True 262857 True 6167730 True 26215680 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27237241 GSE250381 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 821152 run-level positive gene IDs (SRR27237241.gene_counts.tsv) True 3022746 run-level positive transcript IDs (SRR27237241.transcript_counts.tsv) True 75751290 run-level read assignments True 91595291 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27237242 GSE250381 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 825680 run-level positive gene IDs (SRR27237242.gene_counts.tsv) True 3026957 run-level positive transcript IDs (SRR27237242.transcript_counts.tsv) True 99500658 run-level read assignments True 162946733 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27237243 GSE250381 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 829048 run-level positive gene IDs (SRR27237243.gene_counts.tsv) True 3030144 run-level positive transcript IDs (SRR27237243.transcript_counts.tsv) True 165904200 run-level read assignments True 163735815 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27237244 GSE250381 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 825387 run-level positive gene IDs (SRR27237244.gene_counts.tsv) True 3026076 run-level positive transcript IDs (SRR27237244.transcript_counts.tsv) True 98356203 run-level read assignments True 148609756 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27405402 GSE252344 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 816467 run-level positive gene IDs (SRR27405402.gene_counts.tsv) True 4749141 run-level positive transcript IDs (SRR27405402.transcript_counts.tsv) True 26238363 run-level read assignments True 54914644 run-level GTF True 176797 False True 59810 True 926857 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27406895 GSE252416 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 812539 run-level positive gene IDs (SRR27406895.gene_counts.tsv) True 4746853 run-level positive transcript IDs (SRR27406895.transcript_counts.tsv) True 8515030 run-level read assignments True 36286472 run-level GTF True 107601 False True 20825 True 312682 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27935476 GSE255520 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 823294 run-level positive gene IDs (Ms_Retina.gene_counts.tsv) True 3022467 run-level positive transcript IDs (Ms_Retina.transcript_counts.tsv) True 142180844 run-level read assignments True 142693277 run-level GTF False True 313831 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27935477 GSE255520 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 826202 run-level positive gene IDs (Ms_RGC.gene_counts.tsv) True 3026591 run-level positive transcript IDs (Ms_RGC.transcript_counts.tsv) True 259167740 run-level read assignments True 154430343 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR27935479 GSE255520 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 824528 run-level positive gene IDs (Ms_WT_P40.gene_counts.tsv) True 3024191 run-level positive transcript IDs (Ms_WT_P40.transcript_counts.tsv) True 181176958 run-level read assignments True 153481961 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30166096 GSE274249 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 846869 run-level positive gene IDs (SRR30166096.gene_counts.tsv) True 4785310 run-level positive transcript IDs (SRR30166096.transcript_counts.tsv) True 1522210394 run-level read assignments True 275326850 run-level GTF True 1450790 True 395869 True 6629954 True 29311391 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30166097 GSE274249 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 831096 run-level positive gene IDs (SRR30166097.gene_counts.tsv) True 4759427 run-level positive transcript IDs (SRR30166097.transcript_counts.tsv) True 261513965 run-level read assignments True 180976942 run-level GTF True 609041 True 417559 True 3282950 True 10961183 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30166098 GSE274249 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849953 run-level positive gene IDs (SRR30166098.gene_counts.tsv) True 4791388 run-level positive transcript IDs (SRR30166098.transcript_counts.tsv) True 1900230297 run-level read assignments True 291261838 run-level GTF True 568498 True 657394 True 5648877 True 29919266 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30166099 GSE274249 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 830874 run-level positive gene IDs (SRR30166099.gene_counts.tsv) True 4759734 run-level positive transcript IDs (SRR30166099.transcript_counts.tsv) True 250067318 run-level read assignments True 176471695 run-level GTF True 255141 True 290771 True 2254529 True 7828634 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209150 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450898 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209150 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209150 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209151 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450897 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209151 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209151 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209152 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450896 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209152 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209152 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209153 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450895 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209153 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209153 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209154 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450894 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209154 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209154 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209155 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450893 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209155 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209155 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209156 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450892 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209156 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209156 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209158 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450890 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209158 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209158 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209159 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450889 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209159 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209159 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209160 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450888 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209160 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209160 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209162 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450886 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209162 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209162 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209163 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450885 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209163 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209163 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209164 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450884 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209164 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209164 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209165 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450883 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209165 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209165 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209166 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450882 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209166 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209166 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209167 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450881 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209167 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209167 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209169 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450879 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209169 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209169 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209170 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450878 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209170 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209170 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209171 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450877 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209171 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209171 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209172 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450876 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209172 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209172 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209173 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450875 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209173 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209173 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209174 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450874 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209174 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209174 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209175 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450873 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209175 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209175 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30209176 GSE274527 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE274527::GSM8450872 isoquant-core-present isoquant-core-present True 1448508 shared study matrix column SRR30209176 (GSE274527.gene_grouped_file_name_counts.tsv) True 2408357 shared study matrix column SRR30209176 (GSE274527.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 165387885 study-level GTF (GSE274527.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639543 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 853305 run-level positive gene IDs (ONT10X2_20.gene_counts.tsv) True 4799448 run-level positive transcript IDs (ONT10X2_20.transcript_counts.tsv) True 5902344177 run-level read assignments True 319242952 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639544 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 853073 run-level positive gene IDs (ONT10X2_19.gene_counts.tsv) True 4799223 run-level positive transcript IDs (ONT10X2_19.transcript_counts.tsv) True 5781694760 run-level read assignments True 320507116 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639545 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 1708486 run-level positive gene IDs (SRR30639545.gene_counts.tsv) True 9602558 run-level positive transcript IDs (SRR30639545.transcript_counts.tsv) True 2697894703 run-level read assignments True 328533823 run-level GTF True 1782138 True 138172 True 10435939 True 42861876 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639546 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 855220 run-level positive gene IDs (ONT10X2_10.gene_counts.tsv) True 4807255 run-level positive transcript IDs (ONT10X2_10.transcript_counts.tsv) True 7895688802 run-level read assignments True 364456110 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639548 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 854906 run-level positive gene IDs (SRR30639548.gene_counts.tsv) True 4807047 run-level positive transcript IDs (SRR30639548.transcript_counts.tsv) True 3254877198 run-level read assignments True 361211442 run-level GTF True 2100043 True 22507 True 11999698 True 58747631 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639549 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 854772 run-level positive gene IDs (ONT10X3_13.gene_counts.tsv) True 4803691 run-level positive transcript IDs (ONT10X3_13.transcript_counts.tsv) True 6480023204 run-level read assignments True 338975852 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639550 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 812294 run-level positive gene IDs (SRR30639550.gene_counts.tsv) True 4748060 run-level positive transcript IDs (SRR30639550.transcript_counts.tsv) True 71764964 run-level read assignments True 12252218 run-level GTF False True 16874 True 112490 True 706743 core_present; downstream_layer_specific diu run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639551 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 827842 run-level positive gene IDs (SRR30639551.gene_counts.tsv) True 4766898 run-level positive transcript IDs (SRR30639551.transcript_counts.tsv) True 750047106 run-level read assignments True 138037276 run-level GTF True 414719 True 59707 True 2098195 True 10539333 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639552 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 856273 run-level positive gene IDs (SRR30639552.gene_counts.tsv) True 4806793 run-level positive transcript IDs (SRR30639552.transcript_counts.tsv) True 2921109796 run-level read assignments True 346562744 run-level GTF True 1493579 True 977430 True 9169703 True 39405446 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639553 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 851788 run-level positive gene IDs (SRR30639553.gene_counts.tsv) True 4797466 run-level positive transcript IDs (SRR30639553.transcript_counts.tsv) True 1993646728 run-level read assignments True 326257617 run-level GTF True 1434075 True 157117 True 8827180 True 37152800 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639554 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 852301 run-level positive gene IDs (SRR30639554.gene_counts.tsv) True 4799713 run-level positive transcript IDs (SRR30639554.transcript_counts.tsv) True 2192636412 run-level read assignments True 340932128 run-level GTF True 1301127 True 115487 True 8032670 True 38240630 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639555 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 853503 run-level positive gene IDs (ONT10X2_6.gene_counts.tsv) True 4802335 run-level positive transcript IDs (ONT10X2_6.transcript_counts.tsv) True 6077565078 run-level read assignments True 350214318 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639556 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 854490 run-level positive gene IDs (SRR30639556.gene_counts.tsv) True 4804642 run-level positive transcript IDs (SRR30639556.transcript_counts.tsv) True 2658475384 run-level read assignments True 352948241 run-level GTF True 1462430 True 39649 True 9035742 True 43506321 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639557 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 853860 run-level positive gene IDs (SRR30639557.gene_counts.tsv) True 4803125 run-level positive transcript IDs (SRR30639557.transcript_counts.tsv) True 2530317599 run-level read assignments True 349876239 run-level GTF True 1405109 True 63548 True 8742819 True 41644743 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30639558 GSE276974 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 853352 run-level positive gene IDs (ONT10X2_3.gene_counts.tsv) True 4802101 run-level positive transcript IDs (ONT10X2_3.transcript_counts.tsv) True 5892648282 run-level read assignments True 347690407 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31435216 GSE283629 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842993 run-level positive gene IDs (SRR31435216.gene_counts.tsv) True 4775239 run-level positive transcript IDs (SRR31435216.transcript_counts.tsv) True 894821049 run-level read assignments True 251649299 run-level GTF True 844411 True 421523 True 3989888 True 16293268 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31435217 GSE283629 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 830603 run-level positive gene IDs (SRR31435217.gene_counts.tsv) True 4758095 run-level positive transcript IDs (SRR31435217.transcript_counts.tsv) True 220694116 run-level read assignments True 180603306 run-level GTF True 490057 True 306505 True 2667573 True 8680431 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31435218 GSE283629 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849518 run-level positive gene IDs (SRR31435218.gene_counts.tsv) True 4790770 run-level positive transcript IDs (SRR31435218.transcript_counts.tsv) True 1857592892 run-level read assignments True 289584704 run-level GTF True 992006 True 262168 True 3933261 True 23656266 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31435219 GSE283629 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 830026 run-level positive gene IDs (SRR31435219.gene_counts.tsv) True 4758500 run-level positive transcript IDs (SRR31435219.transcript_counts.tsv) True 218118267 run-level read assignments True 173244648 run-level GTF True 417737 True 247398 True 2382823 True 7806585 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31632206 GSE283658 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 828694 run-level positive gene IDs (SRR31632206.gene_counts.tsv) True 4758055 run-level positive transcript IDs (SRR31632206.transcript_counts.tsv) True 206106888 run-level read assignments True 170014214 run-level GTF True 469398 True 215043 True 2258752 True 7014875 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31632207 GSE283658 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 844959 run-level positive gene IDs (SRR31632207.gene_counts.tsv) True 4782442 run-level positive transcript IDs (SRR31632207.transcript_counts.tsv) True 1458631919 run-level read assignments True 252137918 run-level GTF True 939615 True 363664 True 3715409 True 16246471 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR31632208 GSE283658 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 840654 run-level positive gene IDs (SRR31632208.gene_counts.tsv) True 4775101 run-level positive transcript IDs (SRR31632208.transcript_counts.tsv) True 953359539 run-level read assignments True 223953050 run-level GTF True 752880 True 342384 True 3287791 True 13659131 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR34899601 GSE283658 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 829133 run-level positive gene IDs (SRR34899601.gene_counts.tsv) True 4759152 run-level positive transcript IDs (SRR34899601.transcript_counts.tsv) True 426395359 run-level read assignments True 194333388 run-level GTF True 45083 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154422 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 840282 run-level positive gene IDs (SRR32154422.gene_counts.tsv) True 4766341 run-level positive transcript IDs (SRR32154422.transcript_counts.tsv) True 1029199395 run-level read assignments True 206056955 run-level GTF True 707763 True 786028 True 5034237 True 17354865 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154423 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839419 run-level positive gene IDs (SRR32154423.gene_counts.tsv) True 4765818 run-level positive transcript IDs (SRR32154423.transcript_counts.tsv) True 1012753745 run-level read assignments True 199744761 run-level GTF True 506082 True 330554 True 3926809 True 14375304 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154424 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839040 run-level positive gene IDs (SRR32154424.gene_counts.tsv) True 4766781 run-level positive transcript IDs (SRR32154424.transcript_counts.tsv) True 758739569 run-level read assignments True 225623689 run-level GTF True 395412 True 161080 True 3271296 True 13427130 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154425 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842084 run-level positive gene IDs (SRR32154425.gene_counts.tsv) True 4770094 run-level positive transcript IDs (SRR32154425.transcript_counts.tsv) True 901887340 run-level read assignments True 234822695 run-level GTF True 867780 True 909670 True 5977460 True 20194898 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154426 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 837986 run-level positive gene IDs (SRR32154426.gene_counts.tsv) True 4763579 run-level positive transcript IDs (SRR32154426.transcript_counts.tsv) True 665760147 run-level read assignments True 204167972 run-level GTF True 721210 True 855588 True 4953071 True 15866842 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154427 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839269 run-level positive gene IDs (SRR32154427.gene_counts.tsv) True 4767730 run-level positive transcript IDs (SRR32154427.transcript_counts.tsv) True 759554698 run-level read assignments True 210691986 run-level GTF True 651139 True 725246 True 4725996 True 17780011 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154428 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843419 run-level positive gene IDs (SRR32154428.gene_counts.tsv) True 4770811 run-level positive transcript IDs (SRR32154428.transcript_counts.tsv) True 1105763186 run-level read assignments True 225855731 run-level GTF True 880346 True 918320 True 6437479 True 18374842 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154429 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842532 run-level positive gene IDs (SRR32154429.gene_counts.tsv) True 4769472 run-level positive transcript IDs (SRR32154429.transcript_counts.tsv) True 1014212862 run-level read assignments True 216816018 run-level GTF True 776751 True 774776 True 5859482 True 16404623 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154430 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 845166 run-level positive gene IDs (SRR32154430.gene_counts.tsv) True 4771799 run-level positive transcript IDs (SRR32154430.transcript_counts.tsv) True 1317214767 run-level read assignments True 251909141 run-level GTF True 878236 True 435323 True 6024470 True 19725333 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154431 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 841743 run-level positive gene IDs (SRR32154431.gene_counts.tsv) True 4766804 run-level positive transcript IDs (SRR32154431.transcript_counts.tsv) True 1412702969 run-level read assignments True 207810022 run-level GTF True 599514 True 681557 True 4537815 True 13182801 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32154433 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843262 run-level positive gene IDs (SRR32154433.gene_counts.tsv) True 4771443 run-level positive transcript IDs (SRR32154433.transcript_counts.tsv) True 961803239 run-level read assignments True 235187910 run-level GTF True 31433 True 64843 True 816106 True 2314421 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR36251361 GSE288222 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839815 run-level positive gene IDs (SRR36251361.gene_counts.tsv) True 4765290 run-level positive transcript IDs (SRR36251361.transcript_counts.tsv) True 820320294 run-level read assignments True 211097173 run-level GTF True 716268 True 772144 True 4919801 True 14730750 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32322922 GSE289428 human ONT sample_resolved_bulk per-file, one library per column library/sample GSE289428::GSM8791359 isoquant-core-present isoquant-core-present True 513670 shared study matrix column SRR32322922 (GSE289428.gene_grouped_file_name_counts.tsv) True 1303933 shared study matrix column SRR32322922 (GSE289428.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 152998922 study-level GTF (GSE289428.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32322923 GSE289428 human ONT sample_resolved_bulk per-file, one library per column library/sample GSE289428::GSM8791358 isoquant-core-present isoquant-core-present True 513670 shared study matrix column SRR32322923 (GSE289428.gene_grouped_file_name_counts.tsv) True 1303933 shared study matrix column SRR32322923 (GSE289428.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 152998922 study-level GTF (GSE289428.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32322924 GSE289428 human ONT sample_resolved_bulk per-file, one library per column library/sample GSE289428::GSM8791357 isoquant-core-present isoquant-core-present True 513670 shared study matrix column SRR32322924 (GSE289428.gene_grouped_file_name_counts.tsv) True 1303933 shared study matrix column SRR32322924 (GSE289428.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 152998922 study-level GTF (GSE289428.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32370261 GSE289790 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842664 run-level positive gene IDs (SRR32370261.gene_counts.tsv) True 4780813 run-level positive transcript IDs (SRR32370261.transcript_counts.tsv) True 1089679745 run-level read assignments True 261655176 run-level GTF True 642830 True 237884 True 2770919 True 12642785 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32370262 GSE289790 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 846003 run-level positive gene IDs (SRR32370262.gene_counts.tsv) True 4789646 run-level positive transcript IDs (SRR32370262.transcript_counts.tsv) True 1912315634 run-level read assignments True 283161356 run-level GTF True 699267 True 61361 True 2904437 True 15562490 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771574 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849407 run-level positive gene IDs (SRR32771574.gene_counts.tsv) True 4791377 run-level positive transcript IDs (SRR32771574.transcript_counts.tsv) True 2422747839 run-level read assignments True 361139093 run-level GTF True 1316624 False True 6937466 True 40784645 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771575 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 847959 run-level positive gene IDs (SRR32771575.gene_counts.tsv) True 4787644 run-level positive transcript IDs (SRR32771575.transcript_counts.tsv) True 2113976130 run-level read assignments True 345619618 run-level GTF True 1128453 False True 6548943 True 37497176 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771576 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849048 run-level positive gene IDs (SRR32771576.gene_counts.tsv) True 4791215 run-level positive transcript IDs (SRR32771576.transcript_counts.tsv) True 2294101519 run-level read assignments True 354217893 run-level GTF True 1357042 False True 7453831 True 43225064 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771577 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 848139 run-level positive gene IDs (SRR32771577.gene_counts.tsv) True 4788474 run-level positive transcript IDs (SRR32771577.transcript_counts.tsv) True 2104464951 run-level read assignments True 342321572 run-level GTF True 1296329 False True 7197515 True 39871470 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771578 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 850823 run-level positive gene IDs (SRR32771578.gene_counts.tsv) True 4789903 run-level positive transcript IDs (SRR32771578.transcript_counts.tsv) True 2142958558 run-level read assignments True 346208292 run-level GTF True 955146 False True 6105406 True 28079966 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771579 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 851439 run-level positive gene IDs (SRR32771579.gene_counts.tsv) True 4792096 run-level positive transcript IDs (SRR32771579.transcript_counts.tsv) True 2260314143 run-level read assignments True 352430029 run-level GTF True 1027855 False True 6281587 True 28697407 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771580 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 848460 run-level positive gene IDs (SRR32771580.gene_counts.tsv) True 4784817 run-level positive transcript IDs (SRR32771580.transcript_counts.tsv) True 1734274915 run-level read assignments True 332247032 run-level GTF True 904695 False True 5837843 True 25287456 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR32771581 GSE292324 human PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 848332 run-level positive gene IDs (SRR32771581.gene_counts.tsv) True 4785224 run-level positive transcript IDs (SRR32771581.transcript_counts.tsv) True 1740248082 run-level read assignments True 333550802 run-level GTF True 938553 False True 6056484 True 26150661 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33259865 GSE295352 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838415 run-level positive gene IDs (SRR33259865.gene_counts.tsv) True 3047158 run-level positive transcript IDs (SRR33259865.transcript_counts.tsv) True 1182900007 run-level read assignments True 215407992 run-level GTF True 777279 False True 2168580 True 14913838 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33259866 GSE295352 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 833006 run-level positive gene IDs (SRR33259866.gene_counts.tsv) True 3038907 run-level positive transcript IDs (SRR33259866.transcript_counts.tsv) True 502338144 run-level read assignments True 202534770 run-level GTF True 702873 False True 1955584 True 14451235 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33259867 GSE295352 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 817156 run-level positive gene IDs (SRR33259867.gene_counts.tsv) True 3017949 run-level positive transcript IDs (SRR33259867.transcript_counts.tsv) True 30939267 run-level read assignments True 67980878 run-level GTF True 112506 False True 174412 True 781494 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35432392 GSE295352 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 841848 run-level positive gene IDs (SRR35432392.gene_counts.tsv) True 3054973 run-level positive transcript IDs (SRR35432392.transcript_counts.tsv) True 1543755160 run-level read assignments True 239413722 run-level GTF True 1038668 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35432393 GSE295352 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 841300 run-level positive gene IDs (SRR35432393.gene_counts.tsv) True 3053872 run-level positive transcript IDs (SRR35432393.transcript_counts.tsv) True 1409939486 run-level read assignments True 238332062 run-level GTF True 996403 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35432394 GSE295352 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 820018 run-level positive gene IDs (SRR35432394.gene_counts.tsv) True 3020557 run-level positive transcript IDs (SRR35432394.transcript_counts.tsv) True 46478600 run-level read assignments True 83591661 run-level GTF True 298273 False True 847778 True 6307109 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33259246 GSE295353 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 833852 run-level positive gene IDs (SRR33259246.gene_counts.tsv) True 3036457 run-level positive transcript IDs (SRR33259246.transcript_counts.tsv) True 450299796 run-level read assignments True 215506951 run-level GTF True 797042 False True 1470902 True 7562225 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33259247 GSE295353 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 830951 run-level positive gene IDs (SRR33259247.gene_counts.tsv) True 3031056 run-level positive transcript IDs (SRR33259247.transcript_counts.tsv) True 347239259 run-level read assignments True 198512815 run-level GTF False False True 1374958 True 5648673 core_present; downstream_layer_specific diu;ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33259248 GSE295353 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 832952 run-level positive gene IDs (SRR33259248.gene_counts.tsv) True 3031354 run-level positive transcript IDs (SRR33259248.transcript_counts.tsv) True 310500553 run-level read assignments True 169937196 run-level GTF False False True 309936 True 732779 core_present; downstream_layer_specific diu;ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35432458 GSE295353 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842396 run-level positive gene IDs (SRR35432458.gene_counts.tsv) True 3050491 run-level positive transcript IDs (SRR35432458.transcript_counts.tsv) True 1084957680 run-level read assignments True 259556623 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35432459 GSE295353 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838936 run-level positive gene IDs (SRR35432459.gene_counts.tsv) True 3044449 run-level positive transcript IDs (SRR35432459.transcript_counts.tsv) True 850056042 run-level read assignments True 244855958 run-level GTF True 853589 False True 1633326 True 8378981 core_present; downstream_layer_specific ase run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35432460 GSE295353 mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 810158 run-level positive gene IDs (SRR35432460.gene_counts.tsv) True 3013947 run-level positive transcript IDs (SRR35432460.transcript_counts.tsv) True 4899371 run-level read assignments True 30168848 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33369385 GSE295932 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 831917 run-level positive gene IDs (SRR33369385.gene_counts.tsv) True 4765699 run-level positive transcript IDs (SRR33369385.transcript_counts.tsv) True 274515368 run-level read assignments True 227399610 run-level GTF False True 189526 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33369386 GSE295932 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 814835 run-level positive gene IDs (SRR33369386.gene_counts.tsv) True 4748338 run-level positive transcript IDs (SRR33369386.transcript_counts.tsv) True 16721273 run-level read assignments True 60677279 run-level GTF False True 57173 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33369387 GSE295932 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 834997 run-level positive gene IDs (SRR33369387.gene_counts.tsv) True 4769058 run-level positive transcript IDs (SRR33369387.transcript_counts.tsv) True 498235972 run-level read assignments True 233791232 run-level GTF False True 193371 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR33369388 GSE295932 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 815357 run-level positive gene IDs (SRR33369388.gene_counts.tsv) True 4748718 run-level positive transcript IDs (SRR33369388.transcript_counts.tsv) True 21328302 run-level read assignments True 62872460 run-level GTF False True 60232 False False core_present; downstream_layer_specific diu;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR34364189 GSE301658 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 836669 run-level positive gene IDs (SRR34364189.gene_counts.tsv) True 4787060 run-level positive transcript IDs (SRR34364189.transcript_counts.tsv) True 2226758181 run-level read assignments True 171745659 run-level GTF True 734222 True 275279 True 2252079 True 9509525 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30947478 GSE303762 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 852228 run-level positive gene IDs (SRR30947478.gene_counts.tsv) True 4794503 run-level positive transcript IDs (SRR30947478.transcript_counts.tsv) True 1760442545 run-level read assignments True 324878889 run-level GTF True 834957 True 90960 True 3227780 True 25533958 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR30947479 GSE303762 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 853473 run-level positive gene IDs (SRR30947479.gene_counts.tsv) True 4798541 run-level positive transcript IDs (SRR30947479.transcript_counts.tsv) True 1874853187 run-level read assignments True 337255479 run-level GTF True 855751 True 100575 True 3822613 True 22399172 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267327 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842427 run-level positive gene IDs (SRR35267327.gene_counts.tsv) True 4781098 run-level positive transcript IDs (SRR35267327.transcript_counts.tsv) True 1093654122 run-level read assignments True 286880009 run-level GTF True 693048 True 338380 True 6400704 True 26667375 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267328 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 825813 run-level positive gene IDs (SRR35267328.gene_counts.tsv) True 4753943 run-level positive transcript IDs (SRR35267328.transcript_counts.tsv) True 149574761 run-level read assignments True 156002914 run-level GTF True 36240 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267329 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 845121 run-level positive gene IDs (SRR35267329.gene_counts.tsv) True 4789470 run-level positive transcript IDs (SRR35267329.transcript_counts.tsv) True 1556528702 run-level read assignments True 304993690 run-level GTF True 616776 True 78873 True 5821993 True 28107758 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267330 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838408 run-level positive gene IDs (SRR35267330.gene_counts.tsv) True 4775414 run-level positive transcript IDs (SRR35267330.transcript_counts.tsv) True 862935453 run-level read assignments True 261705126 run-level GTF True 742355 True 173816 False False core_present; downstream_layer_specific apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267331 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 846116 run-level positive gene IDs (SRR35267331.gene_counts.tsv) True 4789152 run-level positive transcript IDs (SRR35267331.transcript_counts.tsv) True 1415784750 run-level read assignments True 329946560 run-level GTF True 905196 True 46300 True 7254373 True 34172835 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267332 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842360 run-level positive gene IDs (SRR35267332.gene_counts.tsv) True 4778372 run-level positive transcript IDs (SRR35267332.transcript_counts.tsv) True 1280569095 run-level read assignments True 285503386 run-level GTF True 873494 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267333 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 1687158 run-level positive gene IDs (SRR35267333.gene_counts.tsv) True 9569044 run-level positive transcript IDs (SRR35267333.transcript_counts.tsv) True 1213532648 run-level read assignments True 285660148 run-level GTF True 670163 True 300514 True 6497295 True 26431133 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267334 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843821 run-level positive gene IDs (SRR35267334.gene_counts.tsv) True 4779987 run-level positive transcript IDs (SRR35267334.transcript_counts.tsv) True 1250937702 run-level read assignments True 256051587 run-level GTF True 1012577 True 574934 True 6396222 True 20970549 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267335 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 1676566 run-level positive gene IDs (SRR35267335.gene_counts.tsv) True 9540338 run-level positive transcript IDs (SRR35267335.transcript_counts.tsv) True 1050155658 run-level read assignments True 209224868 run-level GTF True 858052 True 447579 True 4105991 True 13957057 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267336 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838706 run-level positive gene IDs (SRR35267336.gene_counts.tsv) True 4770627 run-level positive transcript IDs (SRR35267336.transcript_counts.tsv) True 873440559 run-level read assignments True 228884856 run-level GTF True 601345 True 514017 True 4073383 True 15395217 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267337 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 837103 run-level positive gene IDs (SRR35267337.gene_counts.tsv) True 4767980 run-level positive transcript IDs (SRR35267337.transcript_counts.tsv) True 646346537 run-level read assignments True 219473914 run-level GTF True 593881 True 468829 True 4042309 True 15099664 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267338 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843668 run-level positive gene IDs (SRR35267338.gene_counts.tsv) True 4785497 run-level positive transcript IDs (SRR35267338.transcript_counts.tsv) True 1462514631 run-level read assignments True 294619492 run-level GTF True 947715 True 567294 True 6846312 True 30110088 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267339 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 836205 run-level positive gene IDs (SRR35267339.gene_counts.tsv) True 4765817 run-level positive transcript IDs (SRR35267339.transcript_counts.tsv) True 540796592 run-level read assignments True 220735556 run-level GTF True 613418 True 466793 True 4916789 True 18624782 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267340 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 838656 run-level positive gene IDs (SRR35267340.gene_counts.tsv) True 4774981 run-level positive transcript IDs (SRR35267340.transcript_counts.tsv) True 912879641 run-level read assignments True 257841569 run-level GTF True 721576 True 475531 True 5304196 True 23130178 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267341 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 839398 run-level positive gene IDs (SRR35267341.gene_counts.tsv) True 4776781 run-level positive transcript IDs (SRR35267341.transcript_counts.tsv) True 1025293537 run-level read assignments True 258629436 run-level GTF True 713423 True 168775 True 5666701 True 25528453 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267342 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842027 run-level positive gene IDs (SRR35267342.gene_counts.tsv) True 4781163 run-level positive transcript IDs (SRR35267342.transcript_counts.tsv) True 970892826 run-level read assignments True 291937644 run-level GTF True 709443 True 179864 True 5852109 True 25824241 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267343 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 843492 run-level positive gene IDs (SRR35267343.gene_counts.tsv) True 4782850 run-level positive transcript IDs (SRR35267343.transcript_counts.tsv) True 1094235795 run-level read assignments True 296538254 run-level GTF True 754581 True 614020 True 5837765 True 25038811 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267344 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 840568 run-level positive gene IDs (SRR35267344.gene_counts.tsv) True 4778449 run-level positive transcript IDs (SRR35267344.transcript_counts.tsv) True 855737989 run-level read assignments True 282558982 run-level GTF True 656469 True 332118 True 5718730 True 24606194 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35267345 GSE307660 human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 842122 run-level positive gene IDs (SRR35267345.gene_counts.tsv) True 4782151 run-level positive transcript IDs (SRR35267345.transcript_counts.tsv) True 1120844974 run-level read assignments True 286324712 run-level GTF True 570613 True 163181 True 4917326 True 21967787 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586147 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259807 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586147 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586147 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586148 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259806 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586148 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586148 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586149 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259805 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586149 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586149 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586150 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259804 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586150 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586150 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586151 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259803 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586151 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586151 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586152 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259802 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586152 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586152 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586153 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259801 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586153 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586153 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586154 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259800 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586154 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586154 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586155 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259799 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586155 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586155 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586156 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259798 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586156 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586156 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586157 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259797 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586157 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586157 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586158 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259796 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586158 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586158 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586159 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259795 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586159 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586159 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586160 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259794 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586160 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586160 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586161 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259793 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586161 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586161 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586162 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259792 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586162 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586162 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586163 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259775 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586163 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586163 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586164 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259774 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586164 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586164 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586165 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259773 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586165 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586165 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586166 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259772 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586166 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586166 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586167 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259771 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586167 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586167 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586168 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259770 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586168 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586168 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586169 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259769 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586169 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586169 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586170 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259768 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586170 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586170 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586171 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259767 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586171 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586171 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586172 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259766 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586172 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586172 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586173 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259765 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586173 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586173 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586174 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259764 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586174 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586174 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586175 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259763 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586175 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586175 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586176 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259762 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586176 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586176 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586177 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259761 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586177 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586177 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586178 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259760 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586178 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586178 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586179 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259743 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586179 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586179 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586180 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259742 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586180 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586180 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586181 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259741 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586181 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586181 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586182 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259740 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586182 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586182 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586183 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259739 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586183 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586183 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586184 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259738 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586184 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586184 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586185 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259737 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586185 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586185 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586186 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259736 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586186 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586186 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586187 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259735 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586187 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586187 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586188 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259734 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586188 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586188 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586189 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259733 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586189 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586189 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586190 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259732 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586190 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586190 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586191 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259731 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586191 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586191 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586192 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259730 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586192 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586192 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586193 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259729 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586193 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586193 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586194 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259728 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586194 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586194 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586195 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259823 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586195 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586195 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586197 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259821 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586197 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586197 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586198 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259820 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586198 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586198 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586199 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259819 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586199 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586199 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586200 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259818 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586200 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586200 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586201 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259817 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586201 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586201 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586202 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259816 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586202 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586202 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586203 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259815 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586203 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586203 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586204 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259814 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586204 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586204 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586205 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259813 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586205 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586205 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586206 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259812 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586206 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586206 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586207 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259811 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586207 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586207 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586208 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259810 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586208 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586208 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586209 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259809 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586209 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586209 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586210 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259808 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586210 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586210 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586211 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259791 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586211 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586211 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586212 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259790 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586212 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586212 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586213 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259789 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586213 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586213 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586215 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259787 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586215 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586215 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586217 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259785 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586217 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586217 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586218 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259784 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586218 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586218 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586219 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259783 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586219 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586219 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586220 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259782 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586220 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586220 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586222 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259780 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586222 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586222 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586223 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259779 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586223 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586223 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586225 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259777 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586225 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586225 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586227 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259711 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586227 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586227 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586228 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259710 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586228 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586228 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586229 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259709 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586229 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586229 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586230 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259708 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586230 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586230 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586231 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259707 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586231 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586231 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586232 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259706 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586232 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586232 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586233 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259705 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586233 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586233 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586234 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259704 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586234 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586234 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586235 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259703 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586235 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586235 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586236 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259702 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586236 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586236 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586237 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259701 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586237 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586237 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586238 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259700 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586238 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586238 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586239 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259699 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586239 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586239 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586240 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259698 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586240 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586240 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586241 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259697 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586241 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586241 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586242 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259696 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586242 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586242 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586243 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259839 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586243 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586243 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586244 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259838 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586244 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586244 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586245 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259837 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586245 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586245 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586246 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259836 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586246 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586246 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586247 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259835 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586247 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586247 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586248 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259834 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586248 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586248 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586249 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259833 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586249 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586249 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586250 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259832 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586250 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586250 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586251 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259831 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586251 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586251 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586252 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259830 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586252 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586252 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586253 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259829 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586253 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586253 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586254 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259828 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586254 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586254 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586255 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259827 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586255 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586255 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586256 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259826 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586256 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586256 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586257 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259825 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586257 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586257 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586258 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259824 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586258 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586258 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586259 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259759 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586259 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586259 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586260 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259758 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586260 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586260 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586261 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259757 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586261 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586261 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586263 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259755 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586263 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586263 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586264 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259754 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586264 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586264 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586265 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259753 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586265 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586265 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586266 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259752 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586266 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586266 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586267 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259751 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586267 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586267 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586268 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259750 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586268 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586268 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586269 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259749 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586269 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586269 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586270 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259748 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586270 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586270 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586271 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259747 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586271 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586271 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586272 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259746 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586272 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586272 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586274 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259744 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586274 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586274 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586275 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259727 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586275 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586275 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586276 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259726 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586276 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586276 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586277 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259725 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586277 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586277 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586278 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259724 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586278 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586278 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586279 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259723 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586279 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586279 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586280 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259722 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586280 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586280 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586281 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259721 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586281 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586281 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586282 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259720 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586282 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586282 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586283 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259719 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586283 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586283 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586284 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259718 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586284 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586284 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586285 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259717 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586285 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586285 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586286 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259716 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586286 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586286 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586287 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259715 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586287 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586287 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586288 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259714 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586288 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586288 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586289 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259713 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586289 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586289 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586290 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259712 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586290 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586290 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586291 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259695 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586291 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586291 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586292 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259694 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586292 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586292 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586293 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259693 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586293 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586293 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586294 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259692 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586294 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586294 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586295 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259691 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586295 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586295 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586296 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259690 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586296 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586296 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586297 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259689 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586297 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586297 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586298 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259688 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586298 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586298 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586299 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259687 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586299 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586299 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586300 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259686 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586300 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586300 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586301 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259685 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586301 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586301 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586302 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259684 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586302 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586302 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586303 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259683 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586303 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586303 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586304 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259682 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586304 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586304 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586305 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259681 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586305 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586305 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586306 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259680 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586306 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586306 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586307 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259663 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586307 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586307 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586308 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259662 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586308 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586308 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586309 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259661 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586309 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586309 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586310 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259660 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586310 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586310 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586311 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259659 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586311 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586311 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586312 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259658 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586312 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586312 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586313 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259657 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586313 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586313 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586314 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259656 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586314 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586314 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586315 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259655 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586315 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586315 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586316 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259654 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586316 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586316 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586317 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259653 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586317 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586317 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586318 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259652 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586318 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586318 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586319 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259651 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586319 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586319 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586320 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259650 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586320 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586320 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586321 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259649 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586321 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586321 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586323 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259850 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586323 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586323 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586324 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259849 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586324 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586324 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586325 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259848 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586325 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586325 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586326 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259847 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586326 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586326 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586327 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259846 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586327 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586327 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586328 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259845 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586328 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586328 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586329 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259844 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586329 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586329 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586330 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259843 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586330 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586330 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586331 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259842 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586331 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586331 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586332 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259841 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586332 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586332 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586333 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259840 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586333 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586333 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586334 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259679 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586334 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586334 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586335 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259678 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586335 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586335 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586336 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259677 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586336 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586336 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586337 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259676 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586337 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586337 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586338 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259675 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586338 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586338 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586339 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259674 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586339 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586339 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586340 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259673 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586340 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586340 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586341 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259672 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586341 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586341 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586342 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259671 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586342 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586342 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586343 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259670 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586343 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586343 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586344 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259669 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586344 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586344 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586345 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259668 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586345 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586345 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586346 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259667 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586346 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586346 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586347 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259666 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586347 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586347 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586348 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259665 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586348 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586348 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586349 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259664 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586349 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586349 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586350 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259647 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586350 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586350 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586351 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259646 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586351 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586351 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586352 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259645 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586352 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586352 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586353 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259644 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586353 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586353 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586354 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259643 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586354 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586354 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586355 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259642 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586355 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586355 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586356 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259641 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586356 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586356 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586357 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259640 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586357 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586357 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586358 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259639 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586358 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586358 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586359 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259638 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586359 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586359 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586360 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259637 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586360 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586360 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586361 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259636 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586361 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586361 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586362 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259635 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586362 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586362 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586363 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259634 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586363 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586363 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586364 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259633 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586364 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586364 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586365 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259632 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586365 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586365 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586366 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259631 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586366 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586366 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR35586367 GSE309071 mouse ONT sample_resolved_single_cell per-file, one library per column mapped cell identity GSE309071::GSM9259630 isoquant-core-present isoquant-core-present True 18923003 shared study matrix column SRR35586367 (GSE309071.gene_grouped_file_name_counts.matrix.mtx) True 20134965 shared study matrix column SRR35586367 (GSE309071.transcript_grouped_file_name_counts.matrix.mtx) True shared study-level core asset; bytes not independently attributed True 230472560 study-level GTF (GSE309071.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR36480452 GSE314176 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 848004 run-level positive gene IDs (SRR36480452.gene_counts.tsv) True 3059643 run-level positive transcript IDs (SRR36480452.transcript_counts.tsv) True 2132916069 run-level read assignments True 349187267 run-level GTF True 2341330 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR36480453 GSE314176 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849025 run-level positive gene IDs (SRR36480453.gene_counts.tsv) True 3061268 run-level positive transcript IDs (SRR36480453.transcript_counts.tsv) True 2319608372 run-level read assignments True 356443261 run-level GTF True 2382745 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR36480454 GSE314176 mouse PacBio barcode_resolved droplet, adapter-anchored barcodes capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 814542 run-level positive gene IDs (SRR36480454.gene_counts.tsv) True 3020626 run-level positive transcript IDs (SRR36480454.transcript_counts.tsv) True 298573827 run-level read assignments True 52190044 run-level GTF True 264075 False False False core_present; downstream_layer_specific ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224853 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::OPC1 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224853 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224853 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224854 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::OPC1 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224854 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224854 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224855 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::OPC2 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224855 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224855 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224856 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::OPC2 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224856 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224856 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224857 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo1_1 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224857 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224857 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224858 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo1_1 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224858 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224858 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224859 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo1_2 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224859 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224859 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224860 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo1_2 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224860 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224860 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224861 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo5_1 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224861 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224861 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224862 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo5_1 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224862 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224862 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224863 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo5_2 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224863 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224863 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 SRR3224864 GSE76026 mouse PacBio sample_resolved_single_cell per-file, one library per column mapped cell identity GSE76026::Oligo5_2 isoquant-core-present isoquant-core-present True 340117 shared study matrix column SRR3224864 (GSE76026.gene_grouped_file_name_counts.tsv) True 209159 shared study matrix column SRR3224864 (GSE76026.transcript_grouped_file_name_counts.tsv) True shared study-level core asset; bytes not independently attributed True 34955626 study-level GTF (GSE76026.transcript_models.gtf); shared by the study's runs False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 E6.5 OWN_ASE_scONT mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849867 run-level positive gene IDs (E6.5.gene_counts.tsv) True 3068046 run-level positive transcript IDs (E6.5.transcript_counts.tsv) True 7806764207 run-level read assignments True 274911483 run-level GTF True 2646972 True 1296355 True 11965059 True 72019458 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 E7.5 OWN_ASE_scONT mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 851065 run-level positive gene IDs (E7.5.gene_counts.tsv) True 3069169 run-level positive transcript IDs (E7.5.transcript_counts.tsv) True 7820816665 run-level read assignments True 279588122 run-level GTF True 4887384 True 2528518 True 21181722 True 98255848 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 E8.5 OWN_ASE_scONT mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 849908 run-level positive gene IDs (E8.5.gene_counts.tsv) True 3066479 run-level positive transcript IDs (E8.5.transcript_counts.tsv) True 7606774067 run-level read assignments True 286043699 run-level GTF True 4417919 True 2408174 True 19920278 True 103342450 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 FJ_E6.5 OWN_ASE_scONT mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 850753 run-level positive gene IDs (FJ_E6.5.gene_counts.tsv) True 3070295 run-level positive transcript IDs (FJ_E6.5.transcript_counts.tsv) True 8349202142 run-level read assignments True 276764652 run-level GTF True 1888630 True 1070016 True 11221901 True 72012654 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 FJ_E7.5 OWN_ASE_scONT mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 851487 run-level positive gene IDs (FJ_E7.5.gene_counts.tsv) True 3072456 run-level positive transcript IDs (FJ_E7.5.transcript_counts.tsv) True 8135896492 run-level read assignments True 288253708 run-level GTF True 4708435 True 2424149 True 19365923 True 111605517 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 FJ_E8.5 OWN_ASE_scONT mouse ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 854901 run-level positive gene IDs (FJ_E8.5.gene_counts.tsv) True 3077613 run-level positive transcript IDs (FJ_E8.5.transcript_counts.tsv) True 9150822551 run-level read assignments True 291627180 run-level GTF True 6747384 True 3435702 True 26124585 True 122370325 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 A1 benagen_human_ovary human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 837372 run-level positive gene IDs (A1.gene_counts.tsv) True 4767571 run-level positive transcript IDs (A1.transcript_counts.tsv) True 820561716 run-level read assignments True 249316639 run-level GTF True 762780 True 558236 True 5074744 True 20484324 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 Y1 benagen_human_ovary human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 837309 run-level positive gene IDs (Y1.gene_counts.tsv) True 4767169 run-level positive transcript IDs (Y1.transcript_counts.tsv) True 799699822 run-level read assignments True 247745780 run-level GTF True 905048 True 702212 True 5779194 True 22455662 core_present; downstream_layer_specific run-level evidence audit 2026-09-11 scTHREAD_NAR_release_20260803 benagen_ovary_Young2_ONT benagen_human_ovary human ONT barcode_resolved 10x scONT / wf-single-cell capture-specific cell barcode capture_namespace::corrected_CB (capture mapping pending item-by-item verification) isoquant-core-present isoquant-core-present True 835011 run-level positive gene IDs (Young2.gene_counts.tsv) True 4762757 run-level positive transcript IDs (Young2.transcript_counts.tsv) True 891268360 run-level read assignments True 208333189 run-level GTF False False False False core_present; downstream_layer_specific diu;ase;apa;junction run-level evidence audit 2026-09-11